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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs80083693 chr18:70102270 C/T GAGE2D chrX:49207160-49214420:+ 0.61 7.53 7.1E-10 Box Plot
ACC rs8027415 chr15:59989087 T/G PRHOXNB chr13:28552243-28562774:- 0.62 8.3 4.33E-11 Box Plot
ACC rs80281737 chr6:25368745 C/G GC chr4:72607410-72669758:- 0.75 8.05 1.07E-10 Box Plot
ACC rs80329273 chr7:17261551 T/G TFDP3 chrX:132350697-132352376:- 0.86 8.09 9.3E-11 Box Plot
ACC rs80331392 chr9:96526849 CT/C PLEKHA7 chr11:16798864-17035990:- -1.1 -7.56 6.36E-10 Box Plot
ACC rs8066047 chr17:32522168 G/A TFDP3 chrX:132350697-132352376:- 0.99 8.59 1.52E-11 Box Plot
ACC rs8076995 chr17:4931207 C/T GPR128 chr3:100328433-100414323:+ 0.67 7.52 7.39E-10 Box Plot
ACC rs8080487 chr17:32520897 A/T TFDP3 chrX:132350697-132352376:- 0.99 8.59 1.52E-11 Box Plot
ACC rs810123 chr13:105323973 G/C PRHOXNB chr13:28552243-28562774:- -0.72 -7.77 2.99E-10 Box Plot
ACC rs890395 chr17:48104630 G/C PRHOXNB chr13:28552243-28562774:- -0.71 -9.28 1.3E-12 Box Plot
ACC rs890396 chr17:48104595 C/G PRHOXNB chr13:28552243-28562774:- -0.71 -9.28 1.3E-12 Box Plot
ACC rs893534 chr5:71580313 G/T GDPD5 chr11:75145685-75236948:- -0.78 -7.79 2.75E-10 Box Plot
ACC rs9317705 chr13:69126387 C/G ARID5B chr10:63661059-63856703:+ 0.77 8.68 1.08E-11 Box Plot
ACC rs9333522 chr6:43560746 T/C PRHOXNB chr13:28552243-28562774:- 0.54 7.68 4.15E-10 Box Plot
ACC rs9348673 chr6:25362857 G/A GC chr4:72607410-72669758:- 0.75 8.05 1.07E-10 Box Plot